Cluster: CokerMO_2019_SRR8692231_bin.27_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- CGC Family ID: CGCFAM_00460
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.27_k141_11894 | CokerMO_2019_SRR8692231_bin.27_k141_11894_7 | 4930 | 7524 | + | 3.A.9.1.2 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_11894 | CokerMO_2019_SRR8692231_bin.27_k141_11894_8 | 7533 | 7706 | + | DUF4250 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.27_k141_11894 | CokerMO_2019_SRR8692231_bin.27_k141_11894_9 | 7785 | 8243 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_11894 | CokerMO_2019_SRR8692231_bin.27_k141_11894_10 | 8379 | 9083 | + | CE4 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_11894_7
Type: TC
Location: 4930 - 7524 (+)
Type: TC
Location: 4930 - 7524 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_11894_8
Type: pfam
Location: 7533 - 7706 (+)
Type: pfam
Location: 7533 - 7706 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_11894_9
Type:
Location: 7785 - 8243 (+)
Type:
Location: 7785 - 8243 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_11894_10
Type: CAZyme
Location: 8379 - 9083 (+)
Type: CAZyme
Location: 8379 - 9083 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.