Cluster: CokerMO_2019_SRR8692231_bin.27_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_11 | 10605 | 12422 | + | GT2 | GT2 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_12 | 12451 | 13452 | + | GT2 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_13 | 13524 | 14924 | + | 9.B.18.1.1 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_14 | 14994 | 16193 | + | LytR_cpsA_psr |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_15 | 16193 | 17125 | + | GT2 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_11
Type: CAZyme
Location: 10605 - 12422 (+)
Type: CAZyme
Location: 10605 - 12422 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_12
Type: CAZyme
Location: 12451 - 13452 (+)
Type: CAZyme
Location: 12451 - 13452 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_13
Type: TC
Location: 13524 - 14924 (+)
Type: TC
Location: 13524 - 14924 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_14
Type: pfam
Location: 14994 - 16193 (+)
Type: pfam
Location: 14994 - 16193 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_15
Type: CAZyme
Location: 16193 - 17125 (+)
Type: CAZyme
Location: 16193 - 17125 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.