Cluster: CokerMO_2019_SRR8692231_bin.27_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- CGC Family ID: CGCFAM_00064
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_1 | 3 | 407 | + | 4.D.2.1.9 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_2 | 566 | 1351 | + | 3.A.1.104.1 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_3 | 1368 | 2663 | + | 3.A.1.103.6 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_4 | 2650 | 4422 | + | GT2 | GT2 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_8683 | CokerMO_2019_SRR8692231_bin.27_k141_8683_5 | 4374 | 5684 | + | GT4 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_1
Type: TC
Location: 3 - 407 (+)
Type: TC
Location: 3 - 407 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_2
Type: TC
Location: 566 - 1351 (+)
Type: TC
Location: 566 - 1351 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_3
Type: TC
Location: 1368 - 2663 (+)
Type: TC
Location: 1368 - 2663 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_4
Type: CAZyme
Location: 2650 - 4422 (+)
Type: CAZyme
Location: 2650 - 4422 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_8683_5
Type: CAZyme
Location: 4374 - 5684 (+)
Type: CAZyme
Location: 4374 - 5684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.