Cluster: CokerMO_2019_SRR8692231_bin.27_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- CGC Family ID: CGCFAM_01058
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_64178 | CokerMO_2019_SRR8692231_bin.27_k141_64178_9 | 8745 | 11792 | - | GH3 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.27_k141_64178 | CokerMO_2019_SRR8692231_bin.27_k141_64178_10 | 12053 | 12775 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_64178 | CokerMO_2019_SRR8692231_bin.27_k141_64178_11 | 12768 | 13481 | - | 3.A.1.124.3 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_64178 | CokerMO_2019_SRR8692231_bin.27_k141_64178_12 | 13657 | 15300 | + | 3.A.1.121.4 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_64178_9
Type: CAZyme
Location: 8745 - 11792 (-)
Type: CAZyme
Location: 8745 - 11792 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_64178_10
Type:
Location: 12053 - 12775 (-)
Type:
Location: 12053 - 12775 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_64178_11
Type: TC
Location: 12768 - 13481 (-)
Type: TC
Location: 12768 - 13481 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_64178_12
Type: TC
Location: 13657 - 15300 (+)
Type: TC
Location: 13657 - 15300 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.