Cluster: CokerMO_2019_SRR8692231_bin.27_CGC21
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_1 | 1 | 1083 | - | 2.A.22.5.3 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_2 | 1288 | 2166 | + | PseudoU_synth_2 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_3 | 2271 | 2771 | - | HbpS-like |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_4 | 2879 | 3730 | - | 1.A.35.3.2 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_5 | 3825 | 4565 | - | H2O2_YaaD |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_6 | 4572 | 6473 | - | 3.A.1.135.5 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_7 | 6473 | 8224 | - | 3.A.1.135.5 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_56901 | CokerMO_2019_SRR8692231_bin.27_k141_56901_8 | 8481 | 12248 | - | GH2 | GH2 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_1
Type: TC
Location: 1 - 1083 (-)
Type: TC
Location: 1 - 1083 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_2
Type: pfam
Location: 1288 - 2166 (+)
Type: pfam
Location: 1288 - 2166 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_3
Type: pfam
Location: 2271 - 2771 (-)
Type: pfam
Location: 2271 - 2771 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_4
Type: TC
Location: 2879 - 3730 (-)
Type: TC
Location: 2879 - 3730 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_5
Type: pfam
Location: 3825 - 4565 (-)
Type: pfam
Location: 3825 - 4565 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_6
Type: TC
Location: 4572 - 6473 (-)
Type: TC
Location: 4572 - 6473 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_7
Type: TC
Location: 6473 - 8224 (-)
Type: TC
Location: 6473 - 8224 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56901_8
Type: CAZyme
Location: 8481 - 12248 (-)
Type: CAZyme
Location: 8481 - 12248 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.