Cluster: CokerMO_2019_SRR8692231_bin.27_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- CGC Family ID: CGCFAM_00092
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.27_k141_56118 | CokerMO_2019_SRR8692231_bin.27_k141_56118_10 | 11233 | 12117 | + | 3.A.1.1.23 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_56118 | CokerMO_2019_SRR8692231_bin.27_k141_56118_11 | 12133 | 13020 | + | 3.A.1.1.25 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_56118 | CokerMO_2019_SRR8692231_bin.27_k141_56118_12 | 13028 | 13207 | + | DUF6903 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_56118 | CokerMO_2019_SRR8692231_bin.27_k141_56118_13 | 13234 | 15402 | + | GH112 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56118_10
Type: TC
Location: 11233 - 12117 (+)
Type: TC
Location: 11233 - 12117 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56118_11
Type: TC
Location: 12133 - 13020 (+)
Type: TC
Location: 12133 - 13020 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56118_12
Type: pfam
Location: 13028 - 13207 (+)
Type: pfam
Location: 13028 - 13207 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_56118_13
Type: CAZyme
Location: 13234 - 15402 (+)
Type: CAZyme
Location: 13234 - 15402 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.