Cluster: CokerMO_2019_SRR8692231_bin.27_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.27_k141_7266 | CokerMO_2019_SRR8692231_bin.27_k141_7266_7 | 5355 | 6875 | + | 2.A.66.2.14 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_7266 | CokerMO_2019_SRR8692231_bin.27_k141_7266_8 | 6968 | 7624 | - | Choline_bind_2 | Choline_bind_2 | Choline_bind_2 | Choline_bind_3 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_7266 | CokerMO_2019_SRR8692231_bin.27_k141_7266_9 | 7818 | 9254 | - | GT5 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_7266_7
Type: TC
Location: 5355 - 6875 (+)
Type: TC
Location: 5355 - 6875 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_7266_8
Type: pfam
Location: 6968 - 7624 (-)
Type: pfam
Location: 6968 - 7624 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_7266_9
Type: CAZyme
Location: 7818 - 9254 (-)
Type: CAZyme
Location: 7818 - 9254 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.