Cluster: CokerMO_2019_SRR8692231_bin.27_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_50827 | CokerMO_2019_SRR8692231_bin.27_k141_50827_26 | 27986 | 29554 | + | CBM50 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_50827 | CokerMO_2019_SRR8692231_bin.27_k141_50827_27 | 29723 | 30583 | + | GHMP_kinases_N | GHMP_kinases_C |
| TF | CokerMO_2019_SRR8692231_bin.27_k141_50827 | CokerMO_2019_SRR8692231_bin.27_k141_50827_28 | 30615 | 31310 | + | GntR |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_50827 | CokerMO_2019_SRR8692231_bin.27_k141_50827_29 | 31527 | 33011 | + | 9.A.11.1.2 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_50827_26
Type: CAZyme
Location: 27986 - 29554 (+)
Type: CAZyme
Location: 27986 - 29554 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_50827_27
Type: pfam
Location: 29723 - 30583 (+)
Type: pfam
Location: 29723 - 30583 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_50827_28
Type: TF
Location: 30615 - 31310 (+)
Type: TF
Location: 30615 - 31310 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_50827_29
Type: TC
Location: 31527 - 33011 (+)
Type: TC
Location: 31527 - 33011 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.