Cluster: CokerMO_2019_SRR8692231_bin.27_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_9 | 5842 | 8976 | - | GH3 |
| TF | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_10 | 9239 | 9958 | + | LytTR |
| STP | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_11 | 9969 | 11258 | + | HATPase_c |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_12 | 11380 | 12375 | + | 8.A.5.1.6 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_13 | 12560 | 13723 | - | CE9 |
| sulfatase | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_14 | 13756 | 14481 | - | S1_9 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_15 | 14925 | 16901 | + | Thioredox_DsbH | Thioredoxin_7 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_47248 | CokerMO_2019_SRR8692231_bin.27_k141_47248_16 | 17063 | 20506 | - | GH101 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_9
Type: CAZyme
Location: 5842 - 8976 (-)
Type: CAZyme
Location: 5842 - 8976 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_10
Type: TF
Location: 9239 - 9958 (+)
Type: TF
Location: 9239 - 9958 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_11
Type: STP
Location: 9969 - 11258 (+)
Type: STP
Location: 9969 - 11258 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_12
Type: TC
Location: 11380 - 12375 (+)
Type: TC
Location: 11380 - 12375 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_13
Type: CAZyme
Location: 12560 - 13723 (-)
Type: CAZyme
Location: 12560 - 13723 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_14
Type: sulfatase
Location: 13756 - 14481 (-)
Type: sulfatase
Location: 13756 - 14481 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_15
Type: pfam
Location: 14925 - 16901 (+)
Type: pfam
Location: 14925 - 16901 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_47248_16
Type: CAZyme
Location: 17063 - 20506 (-)
Type: CAZyme
Location: 17063 - 20506 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.