Cluster: CokerMO_2019_SRR8692231_bin.27_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_43748 | CokerMO_2019_SRR8692231_bin.27_k141_43748_1 | 182 | 2554 | - | GH3 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_43748 | CokerMO_2019_SRR8692231_bin.27_k141_43748_2 | 2931 | 4199 | - | Rotamase |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_43748 | CokerMO_2019_SRR8692231_bin.27_k141_43748_3 | 4594 | 7893 | - | GH3 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_43748 | CokerMO_2019_SRR8692231_bin.27_k141_43748_4 | 8208 | 8903 | + | RelA_SpoT |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_43748 | CokerMO_2019_SRR8692231_bin.27_k141_43748_5 | 8900 | 10153 | + | 2.A.37.3.3 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_43748 | CokerMO_2019_SRR8692231_bin.27_k141_43748_6 | 10275 | 11048 | - | 3.A.1.34.1 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_43748 | CokerMO_2019_SRR8692231_bin.27_k141_43748_7 | 11041 | 11922 | - | 3.A.1.34.1 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_43748_1
Type: CAZyme
Location: 182 - 2554 (-)
Type: CAZyme
Location: 182 - 2554 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_43748_2
Type: pfam
Location: 2931 - 4199 (-)
Type: pfam
Location: 2931 - 4199 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_43748_3
Type: CAZyme
Location: 4594 - 7893 (-)
Type: CAZyme
Location: 4594 - 7893 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_43748_4
Type: pfam
Location: 8208 - 8903 (+)
Type: pfam
Location: 8208 - 8903 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_43748_5
Type: TC
Location: 8900 - 10153 (+)
Type: TC
Location: 8900 - 10153 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_43748_6
Type: TC
Location: 10275 - 11048 (-)
Type: TC
Location: 10275 - 11048 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_43748_7
Type: TC
Location: 11041 - 11922 (-)
Type: TC
Location: 11041 - 11922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.