Cluster: CokerMO_2019_SRR8692231_bin.27_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- CGC Family ID: CGCFAM_00988
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.27_k141_42835 | CokerMO_2019_SRR8692231_bin.27_k141_42835_1 | 1 | 912 | + | 3.A.1.120.6 |
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_42835 | CokerMO_2019_SRR8692231_bin.27_k141_42835_2 | 1088 | 2956 | + | GH13_11 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_42835 | CokerMO_2019_SRR8692231_bin.27_k141_42835_3 | 2961 | 3494 | + | DUF5662 |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_42835 | CokerMO_2019_SRR8692231_bin.27_k141_42835_4 | 3968 | 5353 | + | 2.A.25.1.3 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_42835_1
Type: TC
Location: 1 - 912 (+)
Type: TC
Location: 1 - 912 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_42835_2
Type: CAZyme
Location: 1088 - 2956 (+)
Type: CAZyme
Location: 1088 - 2956 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_42835_3
Type: pfam
Location: 2961 - 3494 (+)
Type: pfam
Location: 2961 - 3494 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_42835_4
Type: TC
Location: 3968 - 5353 (+)
Type: TC
Location: 3968 - 5353 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.