Cluster: CokerMO_2019_SRR8692226_bin.19_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692226_bin.19
- CGC Family ID: CGCFAM_09255
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692226_bin.19_k141_6813 | CokerMO_2019_SRR8692226_bin.19_k141_6813_113 | 113839 | 115095 | + | 2.A.1.33.1 |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_6813 | CokerMO_2019_SRR8692226_bin.19_k141_6813_114 | 115092 | 115802 | + | TrmK | Methyltransf_18 |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_6813 | CokerMO_2019_SRR8692226_bin.19_k141_6813_115 | 115799 | 116899 | + | DUF34_NIF3 |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_6813 | CokerMO_2019_SRR8692226_bin.19_k141_6813_116 | 117167 | 118342 | - | GT4 |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_6813 | CokerMO_2019_SRR8692226_bin.19_k141_6813_117 | 118614 | 119591 | + | Hpr_kinase_N | Hpr_kinase_C |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_6813 | CokerMO_2019_SRR8692226_bin.19_k141_6813_118 | 119758 | 120468 | + | PHP |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_6813 | CokerMO_2019_SRR8692226_bin.19_k141_6813_119 | 120665 | 123301 | + | 4.A.2.1.17 |
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6813_113
Type: TC
Location: 113839 - 115095 (+)
Type: TC
Location: 113839 - 115095 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6813_114
Type: pfam
Location: 115092 - 115802 (+)
Type: pfam
Location: 115092 - 115802 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6813_115
Type: pfam
Location: 115799 - 116899 (+)
Type: pfam
Location: 115799 - 116899 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6813_116
Type: CAZyme
Location: 117167 - 118342 (-)
Type: CAZyme
Location: 117167 - 118342 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6813_117
Type: pfam
Location: 118614 - 119591 (+)
Type: pfam
Location: 118614 - 119591 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6813_118
Type: pfam
Location: 119758 - 120468 (+)
Type: pfam
Location: 119758 - 120468 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6813_119
Type: TC
Location: 120665 - 123301 (+)
Type: TC
Location: 120665 - 123301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAGZMM01
Species
JAGZMM01 sp018364155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.