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Cluster: CokerMO_2019_SRR8692226_bin.19_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692226_bin.19_k141_61494 CokerMO_2019_SRR8692226_bin.19_k141_61494_43 46357 47220 + 2.A.115.1.5
CAZyme CokerMO_2019_SRR8692226_bin.19_k141_61494 CokerMO_2019_SRR8692226_bin.19_k141_61494_44 47480 48907 - GT5
pfam CokerMO_2019_SRR8692226_bin.19_k141_61494 CokerMO_2019_SRR8692226_bin.19_k141_61494_45 48957 50072 - NTP_transferase | Hexapep_GlmU
pfam CokerMO_2019_SRR8692226_bin.19_k141_61494 CokerMO_2019_SRR8692226_bin.19_k141_61494_46 50069 51286 - NTP_transferase | Hexapep_GlmU
CAZyme CokerMO_2019_SRR8692226_bin.19_k141_61494 CokerMO_2019_SRR8692226_bin.19_k141_61494_47 51291 53282 - GH13_9
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_43
Type: TC
Location: 46357 - 47220 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_44
Type: CAZyme
Location: 47480 - 48907 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_45
Type: pfam
Location: 48957 - 50072 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_46
Type: pfam
Location: 50069 - 51286 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_47
Type: CAZyme
Location: 51291 - 53282 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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