Cluster: CokerMO_2019_SRR8692226_bin.19_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692226_bin.19
- CGC Family ID: CGCFAM_05856
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692226_bin.19_k141_61494 | CokerMO_2019_SRR8692226_bin.19_k141_61494_20 | 18172 | 19149 | + | 8.A.5.1.3 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692226_bin.19_k141_61494 | CokerMO_2019_SRR8692226_bin.19_k141_61494_21 | 19400 | 21553 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_61494 | CokerMO_2019_SRR8692226_bin.19_k141_61494_22 | 21642 | 22421 | - | SpoU_methylase | SpoU_sub_bind |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_61494 | CokerMO_2019_SRR8692226_bin.19_k141_61494_23 | 23039 | 24016 | + | GT2 |
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_20
Type: TC
Location: 18172 - 19149 (+)
Type: TC
Location: 18172 - 19149 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_21
Type:
Location: 19400 - 21553 (-)
Type:
Location: 19400 - 21553 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_22
Type: pfam
Location: 21642 - 22421 (-)
Type: pfam
Location: 21642 - 22421 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_61494_23
Type: CAZyme
Location: 23039 - 24016 (+)
Type: CAZyme
Location: 23039 - 24016 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAGZMM01
Species
JAGZMM01 sp018364155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.