Cluster: CokerMO_2019_SRR8692226_bin.19_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692226_bin.19
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_87 | 71123 | 72202 | - | 3.D.1.4.2 |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_88 | 72216 | 72551 | - | Complex1_30kDa |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_89 | 72553 | 73008 | - | 3.D.1.4.2 |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_90 | 73022 | 73894 | - | 3.D.1.4.2 |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_91 | 73896 | 75809 | - | 3.D.1.4.2 |
| STP | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_92 | 76133 | 76732 | - | Nitroreductase |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_93 | 77115 | 80654 | + | GH43_4 |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_43659 | CokerMO_2019_SRR8692226_bin.19_k141_43659_94 | 80840 | 82039 | - | 9.B.141.1.1 |
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_87
Type: TC
Location: 71123 - 72202 (-)
Type: TC
Location: 71123 - 72202 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_88
Type: pfam
Location: 72216 - 72551 (-)
Type: pfam
Location: 72216 - 72551 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_89
Type: TC
Location: 72553 - 73008 (-)
Type: TC
Location: 72553 - 73008 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_90
Type: TC
Location: 73022 - 73894 (-)
Type: TC
Location: 73022 - 73894 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_91
Type: TC
Location: 73896 - 75809 (-)
Type: TC
Location: 73896 - 75809 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_92
Type: STP
Location: 76133 - 76732 (-)
Type: STP
Location: 76133 - 76732 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_93
Type: CAZyme
Location: 77115 - 80654 (+)
Type: CAZyme
Location: 77115 - 80654 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_43659_94
Type: TC
Location: 80840 - 82039 (-)
Type: TC
Location: 80840 - 82039 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAGZMM01
Species
JAGZMM01 sp018364155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.