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Cluster: CokerMO_2019_SRR8692226_bin.19_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme CokerMO_2019_SRR8692226_bin.19_k141_42797 CokerMO_2019_SRR8692226_bin.19_k141_42797_49 58475 59515 - GH105
TC CokerMO_2019_SRR8692226_bin.19_k141_42797 CokerMO_2019_SRR8692226_bin.19_k141_42797_50 59552 60406 - 3.A.1.1.11
TC CokerMO_2019_SRR8692226_bin.19_k141_42797 CokerMO_2019_SRR8692226_bin.19_k141_42797_51 60410 61375 - 3.A.1.1.11
STP CokerMO_2019_SRR8692226_bin.19_k141_42797 CokerMO_2019_SRR8692226_bin.19_k141_42797_52 61534 62880 - SBP_bac_1
TF CokerMO_2019_SRR8692226_bin.19_k141_42797 CokerMO_2019_SRR8692226_bin.19_k141_42797_53 62974 63843 - HTH_AraC | HTH_AraC
TC CokerMO_2019_SRR8692226_bin.19_k141_42797 CokerMO_2019_SRR8692226_bin.19_k141_42797_54 63821 65629 - 9.B.33.1.1
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_42797_49
Type: CAZyme
Location: 58475 - 59515 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_42797_50
Type: TC
Location: 59552 - 60406 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_42797_51
Type: TC
Location: 60410 - 61375 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_42797_52
Type: STP
Location: 61534 - 62880 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_42797_53
Type: TF
Location: 62974 - 63843 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_42797_54
Type: TC
Location: 63821 - 65629 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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