Cluster: CokerMO_2019_SRR8692226_bin.19_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CokerMO_2019_SRR8692226_bin.19
- CGC Family ID: CGCFAM_09254
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692226_bin.19_k141_36955 | CokerMO_2019_SRR8692226_bin.19_k141_36955_2 | 1252 | 1479 | + | 3.D.1.6.4 |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_36955 | CokerMO_2019_SRR8692226_bin.19_k141_36955_3 | 1536 | 2708 | - | Cation_efflux | ZT_dimer |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692226_bin.19_k141_36955 | CokerMO_2019_SRR8692226_bin.19_k141_36955_4 | 2916 | 3323 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_36955 | CokerMO_2019_SRR8692226_bin.19_k141_36955_5 | 3734 | 5257 | + | 8.A.3.3.4 |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_36955 | CokerMO_2019_SRR8692226_bin.19_k141_36955_6 | 5288 | 6409 | + | GT4 |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_36955 | CokerMO_2019_SRR8692226_bin.19_k141_36955_7 | 6406 | 7611 | + | GT4 |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_36955 | CokerMO_2019_SRR8692226_bin.19_k141_36955_8 | 7604 | 8776 | + | GT4 |
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_36955_2
Type: TC
Location: 1252 - 1479 (+)
Type: TC
Location: 1252 - 1479 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_36955_3
Type: pfam
Location: 1536 - 2708 (-)
Type: pfam
Location: 1536 - 2708 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_36955_4
Type:
Location: 2916 - 3323 (+)
Type:
Location: 2916 - 3323 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_36955_5
Type: TC
Location: 3734 - 5257 (+)
Type: TC
Location: 3734 - 5257 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_36955_6
Type: CAZyme
Location: 5288 - 6409 (+)
Type: CAZyme
Location: 5288 - 6409 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_36955_7
Type: CAZyme
Location: 6406 - 7611 (+)
Type: CAZyme
Location: 6406 - 7611 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_36955_8
Type: CAZyme
Location: 7604 - 8776 (+)
Type: CAZyme
Location: 7604 - 8776 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAGZMM01
Species
JAGZMM01 sp018364155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.