Cluster: CokerMO_2019_SRR8692226_bin.19_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692226_bin.19
- CGC Family ID: CGCFAM_02700
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692226_bin.19_k141_6101 | CokerMO_2019_SRR8692226_bin.19_k141_6101_26 | 23494 | 24420 | + | 1.A.35.3.2 |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_6101 | CokerMO_2019_SRR8692226_bin.19_k141_6101_27 | 24557 | 27565 | - | 9.B.34.1.2 |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_6101 | CokerMO_2019_SRR8692226_bin.19_k141_6101_28 | 27598 | 29064 | - | SBP_bac_8 |
| STP | CokerMO_2019_SRR8692226_bin.19_k141_6101 | CokerMO_2019_SRR8692226_bin.19_k141_6101_29 | 29445 | 29957 | - | HD |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_6101 | CokerMO_2019_SRR8692226_bin.19_k141_6101_30 | 30407 | 33193 | + | GT2 | GT2 |
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6101_26
Type: TC
Location: 23494 - 24420 (+)
Type: TC
Location: 23494 - 24420 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6101_27
Type: TC
Location: 24557 - 27565 (-)
Type: TC
Location: 24557 - 27565 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6101_28
Type: pfam
Location: 27598 - 29064 (-)
Type: pfam
Location: 27598 - 29064 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6101_29
Type: STP
Location: 29445 - 29957 (-)
Type: STP
Location: 29445 - 29957 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_6101_30
Type: CAZyme
Location: 30407 - 33193 (+)
Type: CAZyme
Location: 30407 - 33193 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAGZMM01
Species
JAGZMM01 sp018364155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.