Cluster: CokerMO_2019_SRR8692222_bin.2_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_9311 | CokerMO_2019_SRR8692222_bin.2_k141_9311_2 | 225 | 524 | + | 1.E.11.1.10 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_9311 | CokerMO_2019_SRR8692222_bin.2_k141_9311_3 | 527 | 1303 | + | CHAP | SH3_5 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_9311 | CokerMO_2019_SRR8692222_bin.2_k141_9311_4 | 1521 | 2108 | - | Metallophos_2 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_9311 | CokerMO_2019_SRR8692222_bin.2_k141_9311_5 | 2185 | 2889 | + | 3.A.1.122.14 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_9311 | CokerMO_2019_SRR8692222_bin.2_k141_9311_6 | 2891 | 6001 | + | FtsX | FtsX |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_9311 | CokerMO_2019_SRR8692222_bin.2_k141_9311_7 | 6060 | 6410 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_9311 | CokerMO_2019_SRR8692222_bin.2_k141_9311_8 | 6589 | 7689 | - | GH25 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9311_2
Type: TC
Location: 225 - 524 (+)
Type: TC
Location: 225 - 524 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9311_3
Type: pfam
Location: 527 - 1303 (+)
Type: pfam
Location: 527 - 1303 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9311_4
Type: pfam
Location: 1521 - 2108 (-)
Type: pfam
Location: 1521 - 2108 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9311_5
Type: TC
Location: 2185 - 2889 (+)
Type: TC
Location: 2185 - 2889 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9311_6
Type: pfam
Location: 2891 - 6001 (+)
Type: pfam
Location: 2891 - 6001 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9311_7
Type:
Location: 6060 - 6410 (-)
Type:
Location: 6060 - 6410 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9311_8
Type: CAZyme
Location: 6589 - 7689 (-)
Type: CAZyme
Location: 6589 - 7689 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.