Cluster: CokerMO_2019_SRR8692222_bin.2_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- CGC Family ID: CGCFAM_05855
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_9255 | CokerMO_2019_SRR8692222_bin.2_k141_9255_18 | 17096 | 19072 | - | GT4 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_9255 | CokerMO_2019_SRR8692222_bin.2_k141_9255_19 | 19078 | 20103 | - | LPG_synthase_TM |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_9255 | CokerMO_2019_SRR8692222_bin.2_k141_9255_20 | 20108 | 21112 | - | GT4 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_9255 | CokerMO_2019_SRR8692222_bin.2_k141_9255_21 | 21563 | 23605 | + | 9.A.8.1.5 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9255_18
Type: CAZyme
Location: 17096 - 19072 (-)
Type: CAZyme
Location: 17096 - 19072 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9255_19
Type: pfam
Location: 19078 - 20103 (-)
Type: pfam
Location: 19078 - 20103 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9255_20
Type: CAZyme
Location: 20108 - 21112 (-)
Type: CAZyme
Location: 20108 - 21112 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_9255_21
Type: TC
Location: 21563 - 23605 (+)
Type: TC
Location: 21563 - 23605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.