Cluster: CokerMO_2019_SRR8692222_bin.2_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_52581 | CokerMO_2019_SRR8692222_bin.2_k141_52581_19 | 17182 | 18999 | + | GH73 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_52581 | CokerMO_2019_SRR8692222_bin.2_k141_52581_20 | 19009 | 20451 | + | Cadherin-like |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_52581 | CokerMO_2019_SRR8692222_bin.2_k141_52581_21 | 20567 | 20905 | + | PemK_toxin |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_52581 | CokerMO_2019_SRR8692222_bin.2_k141_52581_22 | 20957 | 22582 | + | 9.B.2.1.18 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_52581_19
Type: CAZyme
Location: 17182 - 18999 (+)
Type: CAZyme
Location: 17182 - 18999 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_52581_20
Type: pfam
Location: 19009 - 20451 (+)
Type: pfam
Location: 19009 - 20451 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_52581_21
Type: pfam
Location: 20567 - 20905 (+)
Type: pfam
Location: 20567 - 20905 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_52581_22
Type: TC
Location: 20957 - 22582 (+)
Type: TC
Location: 20957 - 22582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.