Cluster: CokerMO_2019_SRR8692222_bin.2_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- CGC Family ID: CGCFAM_00343
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_51214 | CokerMO_2019_SRR8692222_bin.2_k141_51214_16 | 19321 | 19836 | + | 2.A.87.3.3 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_51214 | CokerMO_2019_SRR8692222_bin.2_k141_51214_17 | 19953 | 20360 | + | PTS_IIB |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_51214 | CokerMO_2019_SRR8692222_bin.2_k141_51214_18 | 20385 | 21863 | + | GH1 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_51214 | CokerMO_2019_SRR8692222_bin.2_k141_51214_19 | 22037 | 23128 | + | GH170 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_51214_16
Type: TC
Location: 19321 - 19836 (+)
Type: TC
Location: 19321 - 19836 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_51214_17
Type: pfam
Location: 19953 - 20360 (+)
Type: pfam
Location: 19953 - 20360 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_51214_18
Type: CAZyme
Location: 20385 - 21863 (+)
Type: CAZyme
Location: 20385 - 21863 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_51214_19
Type: CAZyme
Location: 22037 - 23128 (+)
Type: CAZyme
Location: 22037 - 23128 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.