Cluster: CokerMO_2019_SRR8692222_bin.2_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_39108 | CokerMO_2019_SRR8692222_bin.2_k141_39108_9 | 9580 | 10416 | + | CE1 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_39108 | CokerMO_2019_SRR8692222_bin.2_k141_39108_10 | 10428 | 12188 | + | DUF4015 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_39108 | CokerMO_2019_SRR8692222_bin.2_k141_39108_11 | 12215 | 12979 | - | 1.A.16.3.2 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_39108_9
Type: CAZyme
Location: 9580 - 10416 (+)
Type: CAZyme
Location: 9580 - 10416 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_39108_10
Type: pfam
Location: 10428 - 12188 (+)
Type: pfam
Location: 10428 - 12188 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_39108_11
Type: TC
Location: 12215 - 12979 (-)
Type: TC
Location: 12215 - 12979 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.