Cluster: CokerMO_2019_SRR8692222_bin.2_CGC30
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_17 | 16146 | 17540 | - | GH4 |
| TF | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_18 | 17755 | 18570 | - | HTH_6 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_19 | 18657 | 19046 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_20 | 19125 | 20786 | - | 3.A.1.106.12 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_21 | 20779 | 22524 | - | 3.A.1.106.12 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_22 | 22526 | 22828 | - | YgbA_NO |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_23 | 22825 | 23220 | - | DUF454 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_37087 | CokerMO_2019_SRR8692222_bin.2_k141_37087_24 | 23391 | 24836 | - | GH1 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_17
Type: CAZyme
Location: 16146 - 17540 (-)
Type: CAZyme
Location: 16146 - 17540 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_18
Type: TF
Location: 17755 - 18570 (-)
Type: TF
Location: 17755 - 18570 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_19
Type:
Location: 18657 - 19046 (-)
Type:
Location: 18657 - 19046 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_20
Type: TC
Location: 19125 - 20786 (-)
Type: TC
Location: 19125 - 20786 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_21
Type: TC
Location: 20779 - 22524 (-)
Type: TC
Location: 20779 - 22524 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_22
Type: pfam
Location: 22526 - 22828 (-)
Type: pfam
Location: 22526 - 22828 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_23
Type: pfam
Location: 22825 - 23220 (-)
Type: pfam
Location: 22825 - 23220 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_37087_24
Type: CAZyme
Location: 23391 - 24836 (-)
Type: CAZyme
Location: 23391 - 24836 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.