Cluster: CokerMO_2019_SRR8692222_bin.2_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_274 | 276235 | 278115 | - | 3.A.1.111.2 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_275 | 278226 | 279638 | - | GH1 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_276 | 279833 | 280441 | + | 2.A.88.5.1 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_277 | 280502 | 280927 | - | 2.A.79.1.7 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_274
Type: TC
Location: 276235 - 278115 (-)
Type: TC
Location: 276235 - 278115 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_275
Type: CAZyme
Location: 278226 - 279638 (-)
Type: CAZyme
Location: 278226 - 279638 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_276
Type: TC
Location: 279833 - 280441 (+)
Type: TC
Location: 279833 - 280441 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_277
Type: TC
Location: 280502 - 280927 (-)
Type: TC
Location: 280502 - 280927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| CokerMO_2019_SRR8692222_bin.2_k141_36525_275 | vegan > omnivore | 3.98551 | 0.00457 |