Cluster: CokerMO_2019_SRR8692222_bin.2_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_253 | 251416 | 252495 | - | 9.B.67.1.2 |
| peptidase | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_254 | 252738 | 253664 | + | S09.B04 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_255 | 253701 | 255155 | - | GH1 |
| TF | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_256 | 255233 | 256024 | + | HTH_6 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_257 | 256162 | 257934 | - | 3.A.1.5.18 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_258 | 258151 | 258663 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_259 | 258844 | 260214 | - | 2.A.66.1.28 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_253
Type: TC
Location: 251416 - 252495 (-)
Type: TC
Location: 251416 - 252495 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_254
Type: peptidase
Location: 252738 - 253664 (+)
Type: peptidase
Location: 252738 - 253664 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_255
Type: CAZyme
Location: 253701 - 255155 (-)
Type: CAZyme
Location: 253701 - 255155 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_256
Type: TF
Location: 255233 - 256024 (+)
Type: TF
Location: 255233 - 256024 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_257
Type: TC
Location: 256162 - 257934 (-)
Type: TC
Location: 256162 - 257934 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_258
Type: pfam
Location: 258151 - 258663 (-)
Type: pfam
Location: 258151 - 258663 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_259
Type: TC
Location: 258844 - 260214 (-)
Type: TC
Location: 258844 - 260214 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.