Cluster: CokerMO_2019_SRR8692222_bin.2_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_116 | 115646 | 116356 | + | 3.A.1.147.6 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_117 | 116349 | 117935 | + | 3.A.1.147.6 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_118 | 117987 | 118121 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_119 | 118160 | 120142 | - | Transpeptidase | PBP_dimer | MecA_N |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_120 | 120249 | 121730 | - | GH1 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_121 | 121747 | 122235 | - | Acetyltransf_1 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_36525 | CokerMO_2019_SRR8692222_bin.2_k141_36525_122 | 122282 | 123763 | - | GH1 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_116
Type: TC
Location: 115646 - 116356 (+)
Type: TC
Location: 115646 - 116356 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_117
Type: TC
Location: 116349 - 117935 (+)
Type: TC
Location: 116349 - 117935 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_118
Type:
Location: 117987 - 118121 (+)
Type:
Location: 117987 - 118121 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_119
Type: pfam
Location: 118160 - 120142 (-)
Type: pfam
Location: 118160 - 120142 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_120
Type: CAZyme
Location: 120249 - 121730 (-)
Type: CAZyme
Location: 120249 - 121730 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_121
Type: pfam
Location: 121747 - 122235 (-)
Type: pfam
Location: 121747 - 122235 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36525_122
Type: CAZyme
Location: 122282 - 123763 (-)
Type: CAZyme
Location: 122282 - 123763 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.