Cluster: CokerMO_2019_SRR8692222_bin.2_CGC25
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_38 | 42951 | 44339 | - | 2.A.118.1.4 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_39 | 44661 | 46022 | - | 2.A.66.1.32 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_40 | 46208 | 46750 | + | Rubrerythrin | RUBY_RBDX |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_41 | 47000 | 48256 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_42 | 48268 | 49032 | + | 3.A.1.134.12 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_43 | 49032 | 50315 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_44 | 50316 | 51089 | + | 3.A.1.134.3 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_45 | 51373 | 53727 | - | CE1 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_38
Type: TC
Location: 42951 - 44339 (-)
Type: TC
Location: 42951 - 44339 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_39
Type: TC
Location: 44661 - 46022 (-)
Type: TC
Location: 44661 - 46022 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_40
Type: pfam
Location: 46208 - 46750 (+)
Type: pfam
Location: 46208 - 46750 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_41
Type:
Location: 47000 - 48256 (+)
Type:
Location: 47000 - 48256 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_42
Type: TC
Location: 48268 - 49032 (+)
Type: TC
Location: 48268 - 49032 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_43
Type:
Location: 49032 - 50315 (+)
Type:
Location: 49032 - 50315 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_44
Type: TC
Location: 50316 - 51089 (+)
Type: TC
Location: 50316 - 51089 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_45
Type: CAZyme
Location: 51373 - 53727 (-)
Type: CAZyme
Location: 51373 - 53727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.