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Cluster: CokerMO_2019_SRR8692222_bin.2_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme CokerMO_2019_SRR8692222_bin.2_k141_36164 CokerMO_2019_SRR8692222_bin.2_k141_36164_25 26497 27939 - GH1
CAZyme CokerMO_2019_SRR8692222_bin.2_k141_36164 CokerMO_2019_SRR8692222_bin.2_k141_36164_26 28028 29794 - GH3
TC CokerMO_2019_SRR8692222_bin.2_k141_36164 CokerMO_2019_SRR8692222_bin.2_k141_36164_27 29921 31258 - 4.A.3.2.8
pfam CokerMO_2019_SRR8692222_bin.2_k141_36164 CokerMO_2019_SRR8692222_bin.2_k141_36164_28 31785 32705 + FecCD
pfam CokerMO_2019_SRR8692222_bin.2_k141_36164 CokerMO_2019_SRR8692222_bin.2_k141_36164_29 32702 33667 + FecCD
TC CokerMO_2019_SRR8692222_bin.2_k141_36164 CokerMO_2019_SRR8692222_bin.2_k141_36164_30 33664 34422 + 3.A.1.14.7
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_25
Type: CAZyme
Location: 26497 - 27939 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_26
Type: CAZyme
Location: 28028 - 29794 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_27
Type: TC
Location: 29921 - 31258 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_28
Type: pfam
Location: 31785 - 32705 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_29
Type: pfam
Location: 32702 - 33667 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_30
Type: TC
Location: 33664 - 34422 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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