Cluster: CokerMO_2019_SRR8692222_bin.2_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_12 | 12948 | 14681 | + | 3.A.1.135.5 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_13 | 14678 | 16573 | + | 3.A.1.135.5 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_14 | 16619 | 16963 | - | EutQ | Cupin_2 |
| TF | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_15 | 17088 | 17975 | + | HTH_1 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_36164 | CokerMO_2019_SRR8692222_bin.2_k141_36164_16 | 17976 | 19457 | - | GH1 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_12
Type: TC
Location: 12948 - 14681 (+)
Type: TC
Location: 12948 - 14681 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_13
Type: TC
Location: 14678 - 16573 (+)
Type: TC
Location: 14678 - 16573 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_14
Type: pfam
Location: 16619 - 16963 (-)
Type: pfam
Location: 16619 - 16963 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_15
Type: TF
Location: 17088 - 17975 (+)
Type: TF
Location: 17088 - 17975 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_36164_16
Type: CAZyme
Location: 17976 - 19457 (-)
Type: CAZyme
Location: 17976 - 19457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.