Cluster: CokerMO_2019_SRR8692222_bin.2_CGC19
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_157 | 164356 | 165648 | + | 4.A.3.2.2 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_158 | 165658 | 166692 | + | GH170 |
| STP | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_159 | 166713 | 167624 | + | SIS |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_160 | 167655 | 168806 | + | AnmK |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_161 | 168800 | 169990 | + | 4.A.3.2.8 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_162 | 169972 | 170868 | + | ROK | BcrAD_BadFG |
| STP | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_163 | 170967 | 171530 | - | HD |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_164 | 171776 | 173146 | + | GH1 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_165 | 173452 | 173841 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_166 | 173929 | 174777 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_167 | 174790 | 176943 | + | 3.A.1.114.1 |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_168 | 176940 | 178697 | + | 3.A.1.114.1 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_157
Type: TC
Location: 164356 - 165648 (+)
Type: TC
Location: 164356 - 165648 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_158
Type: CAZyme
Location: 165658 - 166692 (+)
Type: CAZyme
Location: 165658 - 166692 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_159
Type: STP
Location: 166713 - 167624 (+)
Type: STP
Location: 166713 - 167624 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_160
Type: pfam
Location: 167655 - 168806 (+)
Type: pfam
Location: 167655 - 168806 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_161
Type: TC
Location: 168800 - 169990 (+)
Type: TC
Location: 168800 - 169990 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_162
Type: pfam
Location: 169972 - 170868 (+)
Type: pfam
Location: 169972 - 170868 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_163
Type: STP
Location: 170967 - 171530 (-)
Type: STP
Location: 170967 - 171530 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_164
Type: CAZyme
Location: 171776 - 173146 (+)
Type: CAZyme
Location: 171776 - 173146 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_165
Type:
Location: 173452 - 173841 (+)
Type:
Location: 173452 - 173841 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_166
Type:
Location: 173929 - 174777 (+)
Type:
Location: 173929 - 174777 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_167
Type: TC
Location: 174790 - 176943 (+)
Type: TC
Location: 174790 - 176943 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_168
Type: TC
Location: 176940 - 178697 (+)
Type: TC
Location: 176940 - 178697 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.