Cluster: CokerMO_2019_SRR8692222_bin.2_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_134 | 141149 | 142966 | + | GH13_9 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_135 | 142986 | 145367 | + | GT35 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_136 | 145644 | 146438 | + | Zn_dep_PLPC |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_31563 | CokerMO_2019_SRR8692222_bin.2_k141_31563_137 | 146449 | 147696 | + | 2.A.1.24.4 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_134
Type: CAZyme
Location: 141149 - 142966 (+)
Type: CAZyme
Location: 141149 - 142966 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_135
Type: CAZyme
Location: 142986 - 145367 (+)
Type: CAZyme
Location: 142986 - 145367 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_136
Type: pfam
Location: 145644 - 146438 (+)
Type: pfam
Location: 145644 - 146438 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_31563_137
Type: TC
Location: 146449 - 147696 (+)
Type: TC
Location: 146449 - 147696 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.