Cluster: CokerMO_2019_SRR8692222_bin.2_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- CGC Family ID: CGCFAM_00373
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_95 | 106853 | 108718 | + | 3.A.1.121.4 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_96 | 108987 | 109217 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_97 | 109595 | 111784 | - | 3.A.7.7.1 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_98 | 111869 | 112123 | - | TfoX_C |
| TF | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_99 | 112136 | 112888 | - | HTH_6 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_100 | 113012 | 114481 | + | GH1 |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_101 | 114521 | 115537 | - | GH25 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_95
Type: TC
Location: 106853 - 108718 (+)
Type: TC
Location: 106853 - 108718 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_96
Type:
Location: 108987 - 109217 (+)
Type:
Location: 108987 - 109217 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_97
Type: TC
Location: 109595 - 111784 (-)
Type: TC
Location: 109595 - 111784 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_98
Type: pfam
Location: 111869 - 112123 (-)
Type: pfam
Location: 111869 - 112123 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_99
Type: TF
Location: 112136 - 112888 (-)
Type: TF
Location: 112136 - 112888 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_100
Type: CAZyme
Location: 113012 - 114481 (+)
Type: CAZyme
Location: 113012 - 114481 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_101
Type: CAZyme
Location: 114521 - 115537 (-)
Type: CAZyme
Location: 114521 - 115537 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.