Cluster: CokerMO_2019_SRR8692222_bin.2_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- CGC Family ID: CGCFAM_00652
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_53 | 60865 | 62301 | - | GH1 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_54 | 62447 | 62590 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_55 | 62754 | 63578 | - | Lactamase_B |
| TC | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_56 | 63590 | 64939 | - | 2.A.66.1.33 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_53
Type: CAZyme
Location: 60865 - 62301 (-)
Type: CAZyme
Location: 60865 - 62301 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_54
Type:
Location: 62447 - 62590 (-)
Type:
Location: 62447 - 62590 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_55
Type: pfam
Location: 62754 - 63578 (-)
Type: pfam
Location: 62754 - 63578 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_56
Type: TC
Location: 63590 - 64939 (-)
Type: TC
Location: 63590 - 64939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.