Cluster: CokerMO_2019_SRR8692222_bin.2_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692222_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_5 | 3196 | 3510 | + | 4.A.3.2.8 |
| pfam | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_6 | 3561 | 4109 | - | DUF2812 |
| TF | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_7 | 4114 | 4431 | - | PadR |
| CAZyme | CokerMO_2019_SRR8692222_bin.2_k141_19171 | CokerMO_2019_SRR8692222_bin.2_k141_19171_8 | 4569 | 6821 | - | GH3 |
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_5
Type: TC
Location: 3196 - 3510 (+)
Type: TC
Location: 3196 - 3510 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_6
Type: pfam
Location: 3561 - 4109 (-)
Type: pfam
Location: 3561 - 4109 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_7
Type: TF
Location: 4114 - 4431 (-)
Type: TF
Location: 4114 - 4431 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_19171_8
Type: CAZyme
Location: 4569 - 6821 (-)
Type: CAZyme
Location: 4569 - 6821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Beduini
Species
Beduini sp027676805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.