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Cluster: CokerMO_2019_SRR8692222_bin.2_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692222_bin.2_k141_17211 CokerMO_2019_SRR8692222_bin.2_k141_17211_43 39380 40426 + 3.A.1.1.22
TC CokerMO_2019_SRR8692222_bin.2_k141_17211 CokerMO_2019_SRR8692222_bin.2_k141_17211_44 40423 41301 + 3.A.1.1.36
TC CokerMO_2019_SRR8692222_bin.2_k141_17211 CokerMO_2019_SRR8692222_bin.2_k141_17211_45 41313 42131 + 3.A.1.1.36
TC CokerMO_2019_SRR8692222_bin.2_k141_17211 CokerMO_2019_SRR8692222_bin.2_k141_17211_46 42144 43436 + 3.A.1.1.16
pfam CokerMO_2019_SRR8692222_bin.2_k141_17211 CokerMO_2019_SRR8692222_bin.2_k141_17211_47 43448 44695 + Phosphodiest
pfam CokerMO_2019_SRR8692222_bin.2_k141_17211 CokerMO_2019_SRR8692222_bin.2_k141_17211_48 44840 45247 - PTS_IIB
CAZyme CokerMO_2019_SRR8692222_bin.2_k141_17211 CokerMO_2019_SRR8692222_bin.2_k141_17211_49 45261 46697 - GH1
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_17211_43
Type: TC
Location: 39380 - 40426 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_17211_44
Type: TC
Location: 40423 - 41301 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_17211_45
Type: TC
Location: 41313 - 42131 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_17211_46
Type: TC
Location: 42144 - 43436 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_17211_47
Type: pfam
Location: 43448 - 44695 (+)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_17211_48
Type: pfam
Location: 44840 - 45247 (-)
Gene ID: CokerMO_2019_SRR8692222_bin.2_k141_17211_49
Type: CAZyme
Location: 45261 - 46697 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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