Cluster: CokerMO_2019_SRR8692215_bin.33_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 8
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_14 | 12404 | 13294 | + | 9.B.104.1.2 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_15 | 13278 | 14405 | + | Exo_endo_phos |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_16 | 14580 | 17585 | + | 2.A.6.4.3 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_17 | 17677 | 19053 | - | CBM6 | GH43_29 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_18 | 19090 | 21129 | - | CBM51 | GH27 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_19 | 21181 | 22566 | - | CBM6 | GH43_29 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_20 | 22583 | 25732 | - | GH2 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_21 | 25763 | 28360 | - | GH3 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_22 | 28394 | 30319 | - | GH97 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_23 | 30339 | 32807 | - | GH31_4 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_4241 | CokerMO_2019_SRR8692215_bin.33_k141_4241_24 | 32821 | 34149 | - | CBM6 | GH43_29 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_14
Type: TC
Location: 12404 - 13294 (+)
Type: TC
Location: 12404 - 13294 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_15
Type: pfam
Location: 13278 - 14405 (+)
Type: pfam
Location: 13278 - 14405 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_16
Type: TC
Location: 14580 - 17585 (+)
Type: TC
Location: 14580 - 17585 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_17
Type: CAZyme
Location: 17677 - 19053 (-)
Type: CAZyme
Location: 17677 - 19053 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_18
Type: CAZyme
Location: 19090 - 21129 (-)
Type: CAZyme
Location: 19090 - 21129 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_19
Type: CAZyme
Location: 21181 - 22566 (-)
Type: CAZyme
Location: 21181 - 22566 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_20
Type: CAZyme
Location: 22583 - 25732 (-)
Type: CAZyme
Location: 22583 - 25732 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_21
Type: CAZyme
Location: 25763 - 28360 (-)
Type: CAZyme
Location: 25763 - 28360 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_22
Type: CAZyme
Location: 28394 - 30319 (-)
Type: CAZyme
Location: 28394 - 30319 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_23
Type: CAZyme
Location: 30339 - 32807 (-)
Type: CAZyme
Location: 30339 - 32807 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_4241_24
Type: CAZyme
Location: 32821 - 34149 (-)
Type: CAZyme
Location: 32821 - 34149 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.