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Cluster: CokerMO_2019_SRR8692215_bin.33_CGC71

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692215_bin.33_k141_56001 CokerMO_2019_SRR8692215_bin.33_k141_56001_1 76 3138 + 1.B.14.6.1
pfam CokerMO_2019_SRR8692215_bin.33_k141_56001 CokerMO_2019_SRR8692215_bin.33_k141_56001_2 3155 5110 + SusD_RagB | SusD-like_3
TC CokerMO_2019_SRR8692215_bin.33_k141_56001 CokerMO_2019_SRR8692215_bin.33_k141_56001_3 5790 8933 + 1.B.14.6.1
pfam CokerMO_2019_SRR8692215_bin.33_k141_56001 CokerMO_2019_SRR8692215_bin.33_k141_56001_4 8976 10652 + SusD_RagB | SusD-like_3
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_56001 CokerMO_2019_SRR8692215_bin.33_k141_56001_5 11176 13704 + CBM6 | GH43_2 | GH8
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_56001 CokerMO_2019_SRR8692215_bin.33_k141_56001_6 13869 14564 + GH10
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_56001_1
Type: TC
Location: 76 - 3138 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_56001_2
Type: pfam
Location: 3155 - 5110 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_56001_3
Type: TC
Location: 5790 - 8933 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_56001_4
Type: pfam
Location: 8976 - 10652 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_56001_5
Type: CAZyme
Location: 11176 - 13704 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_56001_6
Type: CAZyme
Location: 13869 - 14564 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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