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Cluster: CokerMO_2019_SRR8692215_bin.33_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_88 111883 112341 + 9.B.27.3.3
pfam CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_89 112385 113095 + Methyltransf_30
pfam CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_90 113181 114116 + ZnuA
TC CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_91 114139 114915 + 3.A.1.15.11
TF CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_92 114986 115147 + HTH_AraC
NULL(UNKNOWN) CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_93 115306 115695 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_94 116188 117915 - GH123
pfam CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_95 118043 121387 + TMEM260-like
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_96 121550 122164 + CE4
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_97 122294 124213 - GH43_4
pfam CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_98 124457 126274 - SusD_RagB | SusD-like_3
TC CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_99 126298 129471 - 1.B.14.6.2
pfam CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_100 129525 131291 - SusD_RagB | SusD-like_3
TC CokerMO_2019_SRR8692215_bin.33_k141_53588 CokerMO_2019_SRR8692215_bin.33_k141_53588_101 131297 134419 - 1.B.14.6.1
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_88
Type: TC
Location: 111883 - 112341 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_89
Type: pfam
Location: 112385 - 113095 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_90
Type: pfam
Location: 113181 - 114116 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_91
Type: TC
Location: 114139 - 114915 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_92
Type: TF
Location: 114986 - 115147 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_93
Type:
Location: 115306 - 115695 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_94
Type: CAZyme
Location: 116188 - 117915 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_95
Type: pfam
Location: 118043 - 121387 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_96
Type: CAZyme
Location: 121550 - 122164 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_97
Type: CAZyme
Location: 122294 - 124213 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_98
Type: pfam
Location: 124457 - 126274 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_99
Type: TC
Location: 126298 - 129471 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_100
Type: pfam
Location: 129525 - 131291 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_53588_101
Type: TC
Location: 131297 - 134419 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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