Cluster: CokerMO_2019_SRR8692215_bin.33_CGC64
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- CGC Family ID: CGCFAM_00079
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_49883 | CokerMO_2019_SRR8692215_bin.33_k141_49883_9 | 9948 | 11288 | - | GH144 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_49883 | CokerMO_2019_SRR8692215_bin.33_k141_49883_10 | 11325 | 12215 | - | Exo_endo_phos |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_49883 | CokerMO_2019_SRR8692215_bin.33_k141_49883_11 | 12216 | 14507 | - | GH3 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_49883 | CokerMO_2019_SRR8692215_bin.33_k141_49883_12 | 14560 | 16083 | - | 8.A.46.1.3 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_49883 | CokerMO_2019_SRR8692215_bin.33_k141_49883_13 | 16109 | 19147 | - | 1.B.14.6.1 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_49883_9
Type: CAZyme
Location: 9948 - 11288 (-)
Type: CAZyme
Location: 9948 - 11288 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_49883_10
Type: pfam
Location: 11325 - 12215 (-)
Type: pfam
Location: 11325 - 12215 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_49883_11
Type: CAZyme
Location: 12216 - 14507 (-)
Type: CAZyme
Location: 12216 - 14507 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_49883_12
Type: TC
Location: 14560 - 16083 (-)
Type: TC
Location: 14560 - 16083 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_49883_13
Type: TC
Location: 16109 - 19147 (-)
Type: TC
Location: 16109 - 19147 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.