Cluster: CokerMO_2019_SRR8692215_bin.33_CGC55
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- CGC Family ID: CGCFAM_00138
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_60 | 81183 | 82643 | - | GT2 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_61 | 82686 | 84602 | - | Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_62 | 84655 | 87804 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_63 | 87822 | 89276 | - | 2.A.21.3.7 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_64 | 89365 | 90531 | - | GH171 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_65 | 90953 | 91801 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_66 | 92195 | 95515 | + | 1.B.14.6.1 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_67 | 95568 | 97244 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_45569 | CokerMO_2019_SRR8692215_bin.33_k141_45569_68 | 97967 | 101437 | + | 1.B.14.6.1 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_60
Type: CAZyme
Location: 81183 - 82643 (-)
Type: CAZyme
Location: 81183 - 82643 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_61
Type: pfam
Location: 82686 - 84602 (-)
Type: pfam
Location: 82686 - 84602 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_62
Type:
Location: 84655 - 87804 (-)
Type:
Location: 84655 - 87804 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_63
Type: TC
Location: 87822 - 89276 (-)
Type: TC
Location: 87822 - 89276 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_64
Type: CAZyme
Location: 89365 - 90531 (-)
Type: CAZyme
Location: 89365 - 90531 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_65
Type:
Location: 90953 - 91801 (+)
Type:
Location: 90953 - 91801 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_66
Type: TC
Location: 92195 - 95515 (+)
Type: TC
Location: 92195 - 95515 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_67
Type: pfam
Location: 95568 - 97244 (+)
Type: pfam
Location: 95568 - 97244 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_45569_68
Type: TC
Location: 97967 - 101437 (+)
Type: TC
Location: 97967 - 101437 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.