Cluster: CokerMO_2019_SRR8692215_bin.33_CGC38
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_1 | 427 | 2715 | + | GH20 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_2 | 2767 | 4680 | + | GH29 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_3 | 4810 | 7221 | + | GH3 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_4 | 7218 | 9410 | + | GH92 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_5 | 9931 | 10929 | - | GH130_2 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_6 | 10983 | 12257 | - | MFS_1 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_7 | 12458 | 13852 | + | GH29 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_8 | 13935 | 15044 | + | CBM9 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_9 | 15097 | 16209 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_29630 | CokerMO_2019_SRR8692215_bin.33_k141_29630_10 | 16421 | 19009 | + | 3.A.9.1.2 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_1
Type: CAZyme
Location: 427 - 2715 (+)
Type: CAZyme
Location: 427 - 2715 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_2
Type: CAZyme
Location: 2767 - 4680 (+)
Type: CAZyme
Location: 2767 - 4680 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_3
Type: CAZyme
Location: 4810 - 7221 (+)
Type: CAZyme
Location: 4810 - 7221 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_4
Type: CAZyme
Location: 7218 - 9410 (+)
Type: CAZyme
Location: 7218 - 9410 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_5
Type: CAZyme
Location: 9931 - 10929 (-)
Type: CAZyme
Location: 9931 - 10929 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_6
Type: pfam
Location: 10983 - 12257 (-)
Type: pfam
Location: 10983 - 12257 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_7
Type: CAZyme
Location: 12458 - 13852 (+)
Type: CAZyme
Location: 12458 - 13852 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_8
Type: CAZyme
Location: 13935 - 15044 (+)
Type: CAZyme
Location: 13935 - 15044 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_9
Type:
Location: 15097 - 16209 (+)
Type:
Location: 15097 - 16209 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_29630_10
Type: TC
Location: 16421 - 19009 (+)
Type: TC
Location: 16421 - 19009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.