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Cluster: CokerMO_2019_SRR8692215_bin.33_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_34 41600 44686 + 1.B.14.6.1
TC CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_35 44696 46363 + 8.A.46.1.3
pfam CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_36 46385 48082 + TIG
pfam CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_37 48177 49754 + Metallophos | MetallophosC | MetallophosN
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_38 49751 50860 + GH26
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_39 50892 52199 + CBM32 | GH43_34
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_40 52216 53919 + CBM35 | GH26
CAZyme CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_41 53943 55124 + GH130_1
TC CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_42 55152 56537 + 2.A.2.3.6
pfam CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_43 56901 58091 + GlcNAc_2-epim
TF CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_44 58230 59573 + HTH_8
TC CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_45 60075 61781 + 3.A.3.7.2
TC CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_46 61794 63842 + 3.A.3.7.2
TC CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_47 63857 64426 + 3.A.3.7.2
pfam CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_48 64432 65586 + KdpD
TC CokerMO_2019_SRR8692215_bin.33_k141_25162 CokerMO_2019_SRR8692215_bin.33_k141_25162_49 65606 67045 + 2.A.21.9.1
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_34
Type: TC
Location: 41600 - 44686 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_35
Type: TC
Location: 44696 - 46363 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_36
Type: pfam
Location: 46385 - 48082 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_37
Type: pfam
Location: 48177 - 49754 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_38
Type: CAZyme
Location: 49751 - 50860 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_39
Type: CAZyme
Location: 50892 - 52199 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_40
Type: CAZyme
Location: 52216 - 53919 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_41
Type: CAZyme
Location: 53943 - 55124 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_42
Type: TC
Location: 55152 - 56537 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_43
Type: pfam
Location: 56901 - 58091 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_44
Type: TF
Location: 58230 - 59573 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_45
Type: TC
Location: 60075 - 61781 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_46
Type: TC
Location: 61794 - 63842 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_47
Type: TC
Location: 63857 - 64426 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_48
Type: pfam
Location: 64432 - 65586 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_25162_49
Type: TC
Location: 65606 - 67045 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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