Cluster: CokerMO_2019_SRR8692215_bin.33_CGC30
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_52 | 57358 | 59298 | + | GT51 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_53 | 59510 | 60823 | - | 2.A.40.7.4 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_54 | 60866 | 61597 | - | DUF5020 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_55 | 61739 | 62902 | - | MRJP |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_56 | 62985 | 64016 | - | 8.A.5.1.6 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_57 | 64078 | 64179 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_58 | 64148 | 65020 | + | HTH_AraC |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_22155 | CokerMO_2019_SRR8692215_bin.33_k141_22155_59 | 65182 | 67569 | + | 1.B.14.1.10 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_52
Type: CAZyme
Location: 57358 - 59298 (+)
Type: CAZyme
Location: 57358 - 59298 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_53
Type: TC
Location: 59510 - 60823 (-)
Type: TC
Location: 59510 - 60823 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_54
Type: pfam
Location: 60866 - 61597 (-)
Type: pfam
Location: 60866 - 61597 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_55
Type: pfam
Location: 61739 - 62902 (-)
Type: pfam
Location: 61739 - 62902 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_56
Type: TC
Location: 62985 - 64016 (-)
Type: TC
Location: 62985 - 64016 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_57
Type:
Location: 64078 - 64179 (+)
Type:
Location: 64078 - 64179 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_58
Type: TF
Location: 64148 - 65020 (+)
Type: TF
Location: 64148 - 65020 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_22155_59
Type: TC
Location: 65182 - 67569 (+)
Type: TC
Location: 65182 - 67569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.