Cluster: CokerMO_2019_SRR8692215_bin.33_CGC24
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_114 | 127575 | 130007 | + | GH92 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_115 | 130053 | 130988 | + | Exo_endo_phos |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_116 | 130994 | 132157 | + | GH130_3 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_117 | 133184 | 136315 | + | 1.B.14.6.1 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_118 | 136340 | 137983 | + | 8.A.46.1.4 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_119 | 138226 | 138579 | + | SusD_RagB |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_120 | 138768 | 142373 | + | GH38 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_121 | 142521 | 144827 | + | GH92 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_122 | 144824 | 145612 | + | BSP |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_123 | 145628 | 147970 | + | GH92 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_124 | 148143 | 150425 | + | GH92 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_125 | 150431 | 151615 | + | GH76 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_126 | 151952 | 153529 | + | GH125 |
| TF | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_127 | 153577 | 157587 | - | HTH_AraC |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_128 | 157697 | 158659 | + | IMPDH | FMN_dh | NMO | NMO | ThiG |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_21870 | CokerMO_2019_SRR8692215_bin.33_k141_21870_129 | 158811 | 159917 | - | 3.D.2.3.1 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_114
Type: CAZyme
Location: 127575 - 130007 (+)
Type: CAZyme
Location: 127575 - 130007 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_115
Type: pfam
Location: 130053 - 130988 (+)
Type: pfam
Location: 130053 - 130988 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_116
Type: CAZyme
Location: 130994 - 132157 (+)
Type: CAZyme
Location: 130994 - 132157 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_117
Type: TC
Location: 133184 - 136315 (+)
Type: TC
Location: 133184 - 136315 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_118
Type: TC
Location: 136340 - 137983 (+)
Type: TC
Location: 136340 - 137983 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_119
Type: pfam
Location: 138226 - 138579 (+)
Type: pfam
Location: 138226 - 138579 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_120
Type: CAZyme
Location: 138768 - 142373 (+)
Type: CAZyme
Location: 138768 - 142373 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_121
Type: CAZyme
Location: 142521 - 144827 (+)
Type: CAZyme
Location: 142521 - 144827 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_122
Type: pfam
Location: 144824 - 145612 (+)
Type: pfam
Location: 144824 - 145612 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_123
Type: CAZyme
Location: 145628 - 147970 (+)
Type: CAZyme
Location: 145628 - 147970 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_124
Type: CAZyme
Location: 148143 - 150425 (+)
Type: CAZyme
Location: 148143 - 150425 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_125
Type: CAZyme
Location: 150431 - 151615 (+)
Type: CAZyme
Location: 150431 - 151615 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_126
Type: CAZyme
Location: 151952 - 153529 (+)
Type: CAZyme
Location: 151952 - 153529 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_127
Type: TF
Location: 153577 - 157587 (-)
Type: TF
Location: 153577 - 157587 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_128
Type: pfam
Location: 157697 - 158659 (+)
Type: pfam
Location: 157697 - 158659 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_21870_129
Type: TC
Location: 158811 - 159917 (-)
Type: TC
Location: 158811 - 159917 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.