Cluster: CokerMO_2019_SRR8692215_bin.33_CGC21
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- CGC Family ID: CGCFAM_00217
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_65 | 94178 | 95311 | - | GH43_24 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_66 | 95412 | 96836 | - | GH16_3 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_67 | 96857 | 97762 | - | CBM32 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_68 | 97782 | 99503 | - | 8.A.46.1.3 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_69 | 99515 | 102529 | - | 1.B.14.6.1 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_70 | 102563 | 104467 | - | SusD_RagB | SusD-like_3 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_71 | 104481 | 107627 | - | 1.B.14.6.1 |
| TF | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_72 | 108165 | 112289 | - | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_73 | 112378 | 113517 | - | GH105 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_74 | 113575 | 114897 | - | PL42 |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_75 | 114998 | 116245 | - | GH154 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_76 | 116701 | 117831 | + | Radical_SAM | HemN_C |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_77 | 118320 | 118673 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_78 | 118794 | 120899 | - | GH97 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_65
Type: CAZyme
Location: 94178 - 95311 (-)
Type: CAZyme
Location: 94178 - 95311 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_66
Type: CAZyme
Location: 95412 - 96836 (-)
Type: CAZyme
Location: 95412 - 96836 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_67
Type: CAZyme
Location: 96857 - 97762 (-)
Type: CAZyme
Location: 96857 - 97762 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_68
Type: TC
Location: 97782 - 99503 (-)
Type: TC
Location: 97782 - 99503 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_69
Type: TC
Location: 99515 - 102529 (-)
Type: TC
Location: 99515 - 102529 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_70
Type: pfam
Location: 102563 - 104467 (-)
Type: pfam
Location: 102563 - 104467 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_71
Type: TC
Location: 104481 - 107627 (-)
Type: TC
Location: 104481 - 107627 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_72
Type: TF
Location: 108165 - 112289 (-)
Type: TF
Location: 108165 - 112289 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_73
Type: CAZyme
Location: 112378 - 113517 (-)
Type: CAZyme
Location: 112378 - 113517 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_74
Type: CAZyme
Location: 113575 - 114897 (-)
Type: CAZyme
Location: 113575 - 114897 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_75
Type: CAZyme
Location: 114998 - 116245 (-)
Type: CAZyme
Location: 114998 - 116245 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_76
Type: pfam
Location: 116701 - 117831 (+)
Type: pfam
Location: 116701 - 117831 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_77
Type:
Location: 118320 - 118673 (+)
Type:
Location: 118320 - 118673 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_78
Type: CAZyme
Location: 118794 - 120899 (-)
Type: CAZyme
Location: 118794 - 120899 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.