Cluster: CokerMO_2019_SRR8692215_bin.33_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_1 | 2 | 337 | + | 3.A.1.13.2 |
| TC | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_2 | 459 | 1466 | + | 3.A.1.13.2 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_3 | 1539 | 1736 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_4 | 1832 | 5857 | + | HTH_AraC | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_18667 | CokerMO_2019_SRR8692215_bin.33_k141_18667_5 | 6033 | 7280 | + | GH154 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_1
Type: TC
Location: 2 - 337 (+)
Type: TC
Location: 2 - 337 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_2
Type: TC
Location: 459 - 1466 (+)
Type: TC
Location: 459 - 1466 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_3
Type:
Location: 1539 - 1736 (-)
Type:
Location: 1539 - 1736 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_4
Type: TF
Location: 1832 - 5857 (+)
Type: TF
Location: 1832 - 5857 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_18667_5
Type: CAZyme
Location: 6033 - 7280 (+)
Type: CAZyme
Location: 6033 - 7280 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.