Cluster: CokerMO_2019_SRR8692215_bin.33_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.33
- CGC Family ID: CGCFAM_00069
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.33_k141_9500 | CokerMO_2019_SRR8692215_bin.33_k141_9500_19 | 17644 | 19317 | - | 4.C.1.1.4 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_9500 | CokerMO_2019_SRR8692215_bin.33_k141_9500_20 | 19406 | 20731 | + | UPF0004 | Radical_SAM |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_9500 | CokerMO_2019_SRR8692215_bin.33_k141_9500_21 | 20947 | 21846 | + | Lip_A_acyltrans |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_9500 | CokerMO_2019_SRR8692215_bin.33_k141_9500_22 | 21839 | 22852 | + | GT2 |
| pfam | CokerMO_2019_SRR8692215_bin.33_k141_9500 | CokerMO_2019_SRR8692215_bin.33_k141_9500_23 | 22894 | 23412 | + | MGS |
| CAZyme | CokerMO_2019_SRR8692215_bin.33_k141_9500 | CokerMO_2019_SRR8692215_bin.33_k141_9500_24 | 23573 | 24355 | + | GH23 |
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_9500_19
Type: TC
Location: 17644 - 19317 (-)
Type: TC
Location: 17644 - 19317 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_9500_20
Type: pfam
Location: 19406 - 20731 (+)
Type: pfam
Location: 19406 - 20731 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_9500_21
Type: pfam
Location: 20947 - 21846 (+)
Type: pfam
Location: 20947 - 21846 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_9500_22
Type: CAZyme
Location: 21839 - 22852 (+)
Type: CAZyme
Location: 21839 - 22852 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_9500_23
Type: pfam
Location: 22894 - 23412 (+)
Type: pfam
Location: 22894 - 23412 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.33_k141_9500_24
Type: CAZyme
Location: 23573 - 24355 (+)
Type: CAZyme
Location: 23573 - 24355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900766195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.