Cluster: CokerMO_2019_SRR8692215_bin.31_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_00277
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_143 | 142280 | 144586 | - | GH2 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_144 | 144625 | 145452 | - | 3.A.1.1.34 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_145 | 145468 | 146385 | - | 3.A.1.1.11 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_146 | 146416 | 147735 | - | SBP_bac_1 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_147 | 147818 | 149428 | - | HTH_AraC | HTH_AraC |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_148 | 149458 | 151212 | - | 8.A.59.2.1 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_143
Type: CAZyme
Location: 142280 - 144586 (-)
Type: CAZyme
Location: 142280 - 144586 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_144
Type: TC
Location: 144625 - 145452 (-)
Type: TC
Location: 144625 - 145452 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_145
Type: TC
Location: 145468 - 146385 (-)
Type: TC
Location: 145468 - 146385 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_146
Type: STP
Location: 146416 - 147735 (-)
Type: STP
Location: 146416 - 147735 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_147
Type: TF
Location: 147818 - 149428 (-)
Type: TF
Location: 147818 - 149428 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_148
Type: TC
Location: 149458 - 151212 (-)
Type: TC
Location: 149458 - 151212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.