Cluster: CokerMO_2019_SRR8692215_bin.31_CGC61
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_07912
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_61 | 72286 | 72987 | - | CE4 |
| peptidase | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_62 | 73104 | 74750 | - | S01.UPC |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_63 | 74998 | 76248 | - | LytR_cpsA_psr |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_64 | 76294 | 77736 | - | 9.B.18.1.1 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_65 | 77921 | 78907 | - | GT2 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_66 | 78940 | 81384 | - | GT2 | GT2 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_67 | 81484 | 82227 | - | 3.A.1.103.4 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_68 | 82241 | 83266 | - | ABC2_membrane |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_69 | 83287 | 83844 | - | dTDP_sugar_isom |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_55010 | CokerMO_2019_SRR8692215_bin.31_k141_55010_70 | 83985 | 84902 | - | GT2 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_61
Type: CAZyme
Location: 72286 - 72987 (-)
Type: CAZyme
Location: 72286 - 72987 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_62
Type: peptidase
Location: 73104 - 74750 (-)
Type: peptidase
Location: 73104 - 74750 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_63
Type: pfam
Location: 74998 - 76248 (-)
Type: pfam
Location: 74998 - 76248 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_64
Type: TC
Location: 76294 - 77736 (-)
Type: TC
Location: 76294 - 77736 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_65
Type: CAZyme
Location: 77921 - 78907 (-)
Type: CAZyme
Location: 77921 - 78907 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_66
Type: CAZyme
Location: 78940 - 81384 (-)
Type: CAZyme
Location: 78940 - 81384 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_67
Type: TC
Location: 81484 - 82227 (-)
Type: TC
Location: 81484 - 82227 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_68
Type: pfam
Location: 82241 - 83266 (-)
Type: pfam
Location: 82241 - 83266 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_69
Type: pfam
Location: 83287 - 83844 (-)
Type: pfam
Location: 83287 - 83844 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_55010_70
Type: CAZyme
Location: 83985 - 84902 (-)
Type: CAZyme
Location: 83985 - 84902 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.